Continuous Learning v2 - Instinct-Based Architecture

An advanced learning system that turns your Claude Code sessions into reusable knowledge through atomic "instincts" - small learned behaviors with confidence scoring.

What's New in v2

The Instinct Model

An instinct is a small learned behavior:

---
id: prefer-functional-style
trigger: "when writing new functions"
confidence: 0.7
domain: "code-style"
source: "session-observation"
---

# Prefer Functional Style

## Action
Use functional patterns over classes when appropriate.

## Evidence
- Observed 5 instances of functional pattern preference
- User corrected class-based approach to functional on 2025-01-15

Properties:

• Atomic — one trigger, one action
• Confidence-weighted — 0.3 = tentative, 0.9 = near certain
• Domain-tagged — code-style, testing, git, debugging, workflow, etc.
• Evidence-backed — tracks what observations created it

How It Works

Session Activity
      │
      │ Hooks capture prompts + tool use (100% reliable)
      ▼
┌─────────────────────────────────────────┐
│         observations.jsonl              │
│   (prompts, tool calls, outcomes)       │
└─────────────────────────────────────────┘
      │
      │ Observer agent reads (background, Haiku)
      ▼
┌─────────────────────────────────────────┐
│          PATTERN DETECTION              │
│   • User corrections → instinct         │
│   • Error resolutions → instinct        │
│   • Repeated workflows → instinct       │
└─────────────────────────────────────────┘
      │
      │ Creates/updates
      ▼
┌─────────────────────────────────────────┐
│         instincts/personal/             │
│   • prefer-functional.md (0.7)          │
│   • always-test-first.md (0.9)          │
│   • use-zod-validation.md (0.6)         │
└─────────────────────────────────────────┘
      │
      │ /evolve clusters
      ▼
┌─────────────────────────────────────────┐
│              evolved/                   │
│   • commands/new-feature.md             │
│   • skills/testing-workflow.md          │
│   • agents/refactor-specialist.md       │
└─────────────────────────────────────────┘

Quick Start

1. Enable Observation Hooks

Add to your ~/.claude/settings.json:

{
  "hooks": {
    "PreToolUse": [{
      "matcher": "*",
      "hooks": [{
        "type": "command",
        "command": "~/.claude/skills/continuous-learning-v2/hooks/observe.sh pre"
      }]
    }],
    "PostToolUse": [{
      "matcher": "*",
      "hooks": [{
        "type": "command",
        "command": "~/.claude/skills/continuous-learning-v2/hooks/observe.sh post"
      }]
    }]
  }
}

2. Initialize Directory Structure

mkdir -p ~/.claude/homunculus/{instincts/{personal,inherited},evolved/{agents,skills,commands}}
touch ~/.claude/homunculus/observations.jsonl

3. Run the Observer Agent (Optional)

The observer can run in the background analyzing observations:

# Start background observer
~/.claude/skills/continuous-learning-v2/agents/start-observer.sh

Commands

Configuration

Edit config.json:

{
  "version": "2.0",
  "observation": {
    "enabled": true,
    "store_path": "~/.claude/homunculus/observations.jsonl",
    "max_file_size_mb": 10,
    "archive_after_days": 7
  },
  "instincts": {
    "personal_path": "~/.claude/homunculus/instincts/personal/",
    "inherited_path": "~/.claude/homunculus/instincts/inherited/",
    "min_confidence": 0.3,
    "auto_approve_threshold": 0.7,
    "confidence_decay_rate": 0.05
  },
  "observer": {
    "enabled": true,
    "model": "haiku",
    "run_interval_minutes": 5,
    "patterns_to_detect": [
      "user_corrections",
      "error_resolutions",
      "repeated_workflows",
      "tool_preferences"
    ]
  },
  "evolution": {
    "cluster_threshold": 3,
    "evolved_path": "~/.claude/homunculus/evolved/"
  }
}

File Structure

~/.claude/homunculus/
├── identity.json           # Your profile, technical level
├── observations.jsonl      # Current session observations
├── observations.archive/   # Processed observations
├── instincts/
│   ├── personal/           # Auto-learned instincts
│   └── inherited/          # Imported from others
└── evolved/
    ├── agents/             # Generated

...